Table 1. HHS Select Agents
Phylogeny[1] NCBI Name[2] Threat List Name or Synonym Accession
Fungi Ascomycota Coccidioides immitis            
  Coccidioides posadasii            
Bacteria Alphaproteobacteria Brucella melitensis   NC_003317 NC_003318      
    Brucella melitensis biovar Abortus Brucella abortus          
    Brucella melitensis biovar Suis Brucella suis NC_004310 NC_004311      
    Rickettsia prowazekii   NC_000963        
    Rickettsia rickettsii   NZ_AADJ01000001      
  Betaproteobacteria Burkholderia mallei Pseudomonas mallei NC_002970*        
    Burkholderia pseudomallei Pseudomonas pseudomallei NC_002930* http://www.sanger.ac.uk/Projects/B_pseudomallei/
  Gammaproteobacteria Coxiella burnetii   NC_002971        
    Francisella tularensis            
    Yersinia pestis   NC_003143 NC_004088      
  Firmicutes Bacillus anthracis   NC_003997 NC_003995* NC_004352* NC_002925* NC_004126*
    Clostridium botulinum Botulinum neurotoxin producing species of Clostridium  94 NC_003223* http://www.sanger.ac.uk/Projects/C_botulinum/
    Clostridium baratii Botulinum neurotoxin producing species of Clostridium  94          
    Clostridium butyricum Botulinum neurotoxin producing species of Clostridium  94          
DNA Virus Herpesviridae Cercopithecine herpesvirus 1   NC_004812        
  Poxviridae Monkeypox virus   NC_003310        
    Variola major virus   NC_001611        
    Variola minor virus            
- Strand RNA Virus Arenaviridae Flexal virus            
    Guanarito virus   NC_005077 NC_005082      
    Junin virus   NC_005080 NC_005081      
    Lassa virus   NC_004296 NC_004297      
    Machupo virus   NC_005078 NC_005079      
    Sabia virus            
  Bunyaviridae Crimean-Congo hemorrhagic fever virus   NC_005301 NC_005300 NC_005302    
    Rift Valley fever virus   NC_002043 NC_002044 NC_002045    
  Filoviridae Ivory Coast ebolavirus Ebola viruses          
    Lake Victoria marburgvirus   NC_001608        
    Reston ebolavirus Ebola viruses NC_004161        
    Sudan ebolavirus Ebola viruses          
    Zaire ebolavirus Ebola viruses NC_002549        
  Paramyxoviridae Hendra virus   NC_001906        
    Nipah virus   NC_002728        
+ Strand RNA Virus Flaviviridae Kumlinge virus Central European tick-borne encephalitis Virus          
    Kyasanur forest disease virus            
    Omsk hemorrhagic fever virus   NC_005062        
    Russian Spring-Summer encephalitis virus            
    Tick-borne encephalitis virus   NC_001672        
    Tick-borne encephalitis virus (STRAIN SOFJIN) Far Eastern tick-borne encephalitis 95          
  Togaviridae Eastern equine encephalitis virus   NC_003899        
    Venezuelan equine encephalitis virus   NC_001449        
Toxin Bacteria, Low G+C gram positive, Clostridia Botulinum toxin   AF488749 AB088207 AB082519    
(protein)   Clostridium perfringens epsilon toxin   M95206 M80837      
  Bacteria, Low G+C gram positive, Bacilli Staphylococcal enterotoxin B   M11118        
  Bacteria, gammaproteobactera Shigatoxin   AB035142 AB035143 AF461169 AF461170  
  Animal, mollusca, gastropoda Conotoxins            
  Plant, embryophyta Abrin            
    Ricin            
Toxin Bacteria, gammaproteobacteria Tetrodotoxin            
(small molecule) Protists, alveolata Saxitoxin            
  Fungi, ascomycota Diacetoxyscirpenol            
    T-2 toxin            

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[1]
decker:
Organism is the agent itself(bacteria, virus, fungi, etc. and
Toxin is the product with the phylogeny of the producing organism.
Toxins have their own line, even though the organism may or may not have its own line
[2]
decker:
Best names in current curation. If NCBI gives a different name than LT, the NCBI name is used here. Some of the names here do not exist on NCBI